Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847584.1_cds_XP_016510113.1_22988
CDS Infomation

[gene=LOC107827483] [db_xref=GeneID:107827483] [protein=putative nuclease HARBI1] [protein_id=XP_016510113.1] [location=complement(9859..11295)] [gbkey=CDS]
Sequence

ATGGATTTAATCTCTTCTTTCTCATTTCCTACACAACAAGAAGATTTTAATTTTCCTCCT
AGTTCCAATTTCTTCAGCTTCATTCAAGAACTTGACTTTCCAACTTCTTCTAATCCACTC
CTGCCCAAAAAGCAAAAAATTCATGATTTTGATCACAACCCAGTTGAGAATATTCTAAAC
AAATTTCTGGGGTTGGAAAAAAATCAAGAAAAAATTGACACACAAGTACTAAATTTGTGT
TCTCAACCTATAGAATTAGCGAAAAATTCCCCCGTTTTGATGAATGATCAGACAATGGCT
ATGACTAGTAAAAAACGTAGTCGTGAAAACTCAGGTGAGTTGATTTCGATCCCACAGGAT
TCTCAGCCTTTACAACAAAGAAGATTATGGGTTAAAAACAGGTCAAATGCATGGTGGGAA
CAATGCAACAATCCAGATTTTCCAGAAGAGGAATTCAAAAAAGCTTTTAGAATGAGCAAA
GCTACATTTGATATAATATGTTGTGAATTAGAATCAGTAGTTACAAAAAAAGATACAATG
CTACGTCTGGCGATCCCTGTTCGCCAGCGCGTAGCAGTTTGCATTTGGAGGTTGGCCACA
GGTGCACCACTTCGCGAAGTGTCTAAGCGATTTGGGCTTGGTATATCCACTTGTCATAAG
CTCGTGCTCGAGGTTTGCACAGCAATAAAAGGCGTTTTAATGGCGAAATTCTTACAATGG
CCTAACGATGAAAAGATGAATGAACTAAAACAAGAATTCGAGTCCATTTCAGGTATACAA
AATGTAGGTGGATCAATGTACACTACACACGTTCCGATTATAGCACCAAAAGACAGTGTC
ACAGCTTATTTTAACAAAAGACATACTGAGCGGAATCAAAAGACTTCTTATTCAGTAACC
ATACAAGGGGTTGTTGATCCTAAAGGAATTTTTACTGATGTTTGTATTGGCTGGCCTGGT
TCAATGACAGATGATCAAGTTTTGGAAAAATCAGCTCTTTTTGAAAGAGCAAACAGAGGA
CTTTTAAAGGATATTTGGGTTGTTGGAAATTCAGGATTTCCGTTATTAGATTGGATATTG
GTCCCGTTTTCACACCAGAATTTAACATGGACGCAACACGCGTTTAATGAGAAAGTTGAA
GATGTTCAAAGAGTTGCTAAAGATGCATTTATGAGATTGAAAGGTAGATGGAGTTGTTTA
CAAAAGAGAACAGAAATGAAACTTCAAGATTTGCCTGTTGTATTAGGAGCTTGTTGTGTT
TTGCATAATATTTGTGAAATGAGAGGTGAAGAATTAAGTCCAGAATTAAGGTTTGATTTG
TTTGATGATGAAATTGTACCAGAAAATATTGTGAGATCTATGAGTGCATTACAGGCTAGA
GATCAGATTGCTCACAAGCTTTTGCACCATAATTACTCAGGCACCAACTTCCTTTAA

Peptide Sequence

PEP ID

XP_016510113.1
PEP Infomation

PREDICTED: putative nuclease HARBI1 [Nicotiana tabacum]
Sequence

MDLISSFSFPTQQEDFNFPPSSNFFSFIQELDFPTSSNPLLPKKQKIHDFDHNPVENILN
KFLGLEKNQEKIDTQVLNLCSQPIELAKNSPVLMNDQTMAMTSKKRSRENSGELISIPQD
SQPLQQRRLWVKNRSNAWWEQCNNPDFPEEEFKKAFRMSKATFDIICCELESVVTKKDTM
LRLAIPVRQRVAVCIWRLATGAPLREVSKRFGLGISTCHKLVLEVCTAIKGVLMAKFLQW
PNDEKMNELKQEFESISGIQNVGGSMYTTHVPIIAPKDSVTAYFNKRHTERNQKTSYSVT
IQGVVDPKGIFTDVCIGWPGSMTDDQVLEKSALFERANRGLLKDIWVVGNSGFPLLDWIL
VPFSHQNLTWTQHAFNEKVEDVQRVAKDAFMRLKGRWSCLQKRTEMKLQDLPVVLGACCV
LHNICEMRGEELSPELRFDLFDDEIVPENIVRSMSALQARDQIAHKLLHHNYSGTNFL

Transcript Sequence

Gene sequence data has not been registered.